Index

A

Atom (class in vabene.atom.atom)

AtomFactory (class in vabene.atom.factories.atom_factory)

B

Bond (class in vabene.bond.bond)

BondFactory (class in vabene.bond.factories.bond_factory)

C

clone() (ValenceTracker method)

D

dedupe() (in module vabene.molecule.utilities)

G

get_atom1_id() (Bond method) get_atom2_id() (Bond method) get_atom_ids() (Bond method) get_atomic_number() (Atom method) get_atoms() (AtomFactory method) (Molecule method) (RandomAtomFactory method) get_bonds() (BondFactory method) (Molecule method) (RandomBondFactory method)

get_charge() (Atom method) get_disconnected() (ValenceTracker method) get_free_connected() (ValenceTracker method) get_free_valence() (ValenceTracker method) get_ids_with_free_valence() (ValenceTracker method) get_max_valence() (Atom method) get_num_atoms() (Molecule method) get_num_bonds() (Molecule method) get_num_disconnected() (ValenceTracker method) get_order() (Bond method)

H

has_free_connected() (ValenceTracker method)

M

Molecule (class in vabene.molecule.molecule)

R

RandomAtomFactory (class in vabene.atom.factories.random_atom_factory)

RandomBondFactory (class in vabene.bond.factories.random_bond_factory.random_bond_factory)

V

vabene (module) vabene.atom (module) vabene.atom.atom (module) vabene.atom.factories (module) vabene.atom.factories.atom_factory (module) vabene.atom.factories.random_atom_factory (module) vabene.bond (module) vabene.bond.bond (module)

vabene.bond.factories (module) vabene.bond.factories.bond_factory (module) vabene.bond.factories.random_bond_factory (module) vabene.bond.factories.random_bond_factory.random_bond_factory (module) vabene.bond.factories.random_bond_factory.utilities (module) vabene.molecule (module) vabene.molecule.molecule (module) vabene.molecule.utilities (module) ValenceTracker (class in vabene.bond.factories.random_bond_factory.utilities)

W

with_bond() (ValenceTracker method)